KEGG   Clostridium perfringens 13: CPE0173
Entry
CPE0173           CDS       T00074                                 
Name
(GenBank) collagenase
  KO
K01387  microbial collagenase [EC:3.4.24.3]
Organism
cpe  Clostridium perfringens 13
Brite
KEGG Orthology (KO) [BR:cpe00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:cpe01002]
    CPE0173
  09183 Protein families: signaling and cellular processes
   02042 Bacterial toxins [BR:cpe02042]
    CPE0173
Enzymes [BR:cpe01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.24  Metalloendopeptidases
    3.4.24.3  microbial collagenase
     CPE0173
Peptidases and inhibitors [BR:cpe01002]
 Metallo peptidases
  Family M9
   CPE0173
Bacterial toxins [BR:cpe02042]
 Toxins that damage the extracellular matrix
  Hyaluronidases/Collagenases
   CPE0173
SSDB
Motif
Pfam: Peptidase_M9 Peptidase_M9_N ColG_sub PKD_4 PPC PKD 7TMR-HDED ChitinaseA_N DUF4625
Other DBs
NCBI-ProteinID: BAB79879
UniProt: P43153
Position
222495..225809
AA seq 1104 aa
MKKNLKRGELTKLKLVERWSATFTLAAFILFNSSFKVLAADKKVENSNNGQITREINADQ
ISKTELNNEVATDNNRPLGPSIAPSRARNNKIYTFDELNRMNYSDLVELIKTISYENVPD
LFNFNDGSYTFFSNRDRVQAIIYGLEDSGRTYTADDDKGIPTLVEFLRAGYYLGFYNKQL
SYLNTPQLKNECLPAMKAIQYNSNFRLGTKAQDGVVEALGRLIGNASADPEVINNCIYVL
SDFKDNIDKYGSNYSKGNAVFNLMKGIDYYTNSVIYNTKGYDAKNTEFYNRIDPYMERLE
SLCTIGDKLNNDNAWLVNNALYYTGRMGKFREDPSISQRALERAMKEYPYLSYQYIEAAN
DLDLNFGGKNSSGNDIDFNKIKADAREKYLPKTYTFDDGKFVVKAGDKVTEEKIKRLYWA
SKEVKAQFMRVVQNDKALEEGNPDDILTVVIYNSPEEYKLNRIINGFSTDNGGIYIENIG
TFFTYERTPEESIYTLEELFRHEFTHYLQGRYVVPGMWGQGEFYQEGVLTWYEEGTAEFF
AGSTRTDGIKPRKSVTQGLAYDRNNRMSLYGVLHAKYGSWDFYNYGFALSNYMYNNNMGM
FNKMTNYIKNNDVSGYKDYIASMSSDYGLNDKYQDYMDSLLNNIDNLDVPLVSDEYVNGH
EAKDINEITNDIKEVSNIKDLSSNVEKSQFFTTYDMRGTYVGGRSQGEENDWKDMNSKLN
DILKELSKKSWNGYKTVTAYFVNHKVDGNGNYVYDVVFHGMNTDTNTDVHVNKEPKAVIK
SDSSVIVEEEINFDGTESKDEDGEIKAYEWDFGDGEKSNEAKATHKYNKTGEYEVKLTVT
DNNGGINTESKKIKVVEDKPVEVINESEPNNDFEKANQIAKSNMLVKGTLSEEDYSDKYY
FDVAKKGNVKITLNNLNSVGITWTLYKEGDLNNYVLYATGNDGTVLKGEKTLEPGRYYLS
VYTYDNQSGTYTVNVKGNLKNEVKETAKDAIKEVENNNDFDKAMKVDSNSKIVGTLSNDD
LKDIYSIDIQNPSDLNIVVENLDNIKMNWLLYSADDLSNYVDYANADGNKLSNTCKLNPG
KYYLCVYQFENSGTGNYIVNLQNK
NT seq 3315 nt   +upstreamnt  +downstreamnt
atgaagaaaaacttaaaaaggggagagctaacaaaactgaagttagttgaaagatggtca
gctacctttactttagcagcatttattttatttaatagctcatttaaagtacttgcagct
gataaaaaggtagagaatagtaataatggacagattactagagagattaatgctgatcag
atttctaaaacagaattaaataatgaggtagctacagacaataatagaccattaggacct
agtattgctccatcaagagcaagaaacaacaagatctatacattcgatgaacttaacaga
atgaattatagtgatctagttgaattaataaaaacaataagttatgaaaacgtaccagac
ttatttaattttaatgatggttcatatactttctttagtaatagagatcgtgtacaagct
ataatatatggtctagaggatagtggaagaacttatacagcagatgatgataagggaatt
ccaactttagttgagtttttaagagctggatattatttaggattttataataaacaatta
tcatacctaaatacaccgcagttaaaaaatgagtgtttaccagctatgaaagcgattcaa
tataatagtaattttagattaggaacaaaggcgcaagatggagttgttgaggctttagga
agacttataggtaatgcttcagcagatccagaagttattaataattgcatatatgtttta
agtgattttaaagataatatagataagtatggttctaactatagcaaggggaatgcagta
ttcaaccttatgaaaggtattgattattatactaattcagtaatatacaatactaaggga
tatgatgctaaaaacactgagttctataatagaatagatccatatatggaaagattagaa
agtttatgtacaataggtgataagttaaataatgataatgcttggcttgtaaataatgcc
ttatattacacaggtaggatgggtaagtttagagaagacccatcaatatctcaaagagct
ttagaaagagctatgaaagagtatccttatttatcatatcaatatattgaagctgccaat
gacttagatttaaattttggtggaaaaaattcatcaggaaatgatatagatttcaataag
ataaaagcagatgcaagggaaaaatatcttccaaaaacatatacttttgatgatggcaaa
tttgtagtaaaagctggtgataaagtaacagaagagaagataaaaagattatactgggct
tcaaaggaagttaaggctcaattcatgagagtagttcaaaatgataaggctttagaagag
ggaaatccagatgatattttaactgttgttatttataactcaccagaagagtataagtta
aatcgtataataaatggatttagtactgataatggtggtatatatattgaaaacatagga
actttctttacttatgaaagaacaccagaggaaagtatatatacattagaagaattattc
cgtcatgaatttactcactatcttcaaggtagatatgtagttcctggaatgtggggacaa
ggagaattctatcaagagggagttttaacttggtatgaagaaggaacagcagagttcttt
gctggttcaactagaactgatggaataaaaccaagaaaatcagttacacaaggattagct
tacgatagaaataatagaatgtctttatatggtgtattacatgctaaatatggctcatgg
gatttctataattatggatttgctctatcaaactacatgtacaacaataacatgggaatg
tttaataagatgacaaattacataaagaataatgatgtatctggttataaagattatatt
gcatcaatgagtagtgattacggattaaatgataaatatcaagactatatggattcttta
ttaaacaatattgataacttagatgttcctttagtttcagatgaatatgtaaatggacat
gaagctaaggatataaatgaaataactaatgatataaaagaagtttcaaatataaaagat
ctttctagtaatgttgaaaagtctcaattctttactacttacgatatgagaggaacatat
gtagggggaagaagtcaaggggaagaaaatgactggaaagatatgaattctaagttaaat
gatatattaaaagaattatctaaaaagagctggaatggttataaaacagttactgcatac
tttgtaaatcataaagtagatggaaatggtaactatgtttatgatgttgtattccatgga
atgaatacagatacaaatactgatgttcatgttaataaagaacctaaagctgttataaaa
tctgattcttcagtaatagttgaagaagaaataaactttgatggaacagagtcaaaggat
gaagatggtgaaatcaaagcttatgaatgggactttggagatggagaaaaatctaatgag
gctaaagctactcataagtataataaaactggagaatatgaagtaaaattaacagttaca
gataataacggtggaataaatactgaaagtaaaaagataaaagtagtagaagataaacct
gttgaagttataaatgaaagcgagcctaacaatgattttgaaaaggctaaccaaatagct
aaatctaatatgttagttaagggtactttatcagaagaggactattcagataaatattat
tttgatgtagctaaaaaaggcaatgttaaaatcactcttaataatttaaattcagtagga
ataacttggacactttataaagagggcgacctaaacaattatgttttatatgcaactgga
aatgatggaacagtattaaagggtgaaaagactttagaacctggaagatactatttaagt
gtatatacttatgataatcaatcaggaacttacacagtaaatgtaaaaggaaaccttaaa
aatgaagttaaagaaacagcaaaggatgctataaaagaagttgaaaataacaatgatttt
gataaagctatgaaagtagacagtaatagcaaaatagttggaacattaagcaatgatgat
cttaaggatatttatagcatagatatacaaaatccaagtgacttaaacatagtagttgaa
aacttagacaatataaaaatgaactggttattatattcagctgatgatttaagtaactat
gtggattacgctaatgcagatggaaataaattaagcaacacttgtaagttaaatccgggt
aaatattacttatgtgtttatcaatttgaaaactcaggtactggaaactacatagtgaat
ttacaaaacaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (63)   
   KEGG ORTHOLOGY (1)   
   RefGene (60)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (9)   
   Pfam (9)   
All databases (80)   

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